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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
462
ChIP-seq
7
WGBS
Assay category
462
DNA binding
DNA accessibility
7
DNA methylation
Target of assay
307
transcription factor
82
recombinant protein
77
control
75
histone
75
histone modification
58
RNA binding protein
46
broad histone mark
29
narrow histone mark
22
chromatin remodeller
5
other context
5
other post-translational modification
Date released
554
February, 2021
392
November, 2017
272
August, 2017
264
May, 2021
238
May, 2020
235
October, 2019
164
July, 2018
120
May, 2019
December, 2017
79
April, 2019
77
November, 2018
76
October, 2018
74
July, 2019
58
September, 2018
49
April, 2018
39
August, 2021
39
February, 2018
34
December, 2018
33
November, 2019
31
June, 2019
30
January, 2019
16
March, 2020
8
October, 2017
6
May, 2022
6
September, 2017
5
December, 2019
4
November, 2020
3
August, 2018
3
June, 2018
Available data
469
bam
404
bigWig
402
fastq
376
bed narrowPeak
375
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
3
tar
1
csv
Organism
469
Homo sapiens
Biosample type
375
cell line
85
tissue
9
primary cell
Organ
364
liver
78
brain
15
blood
15
bodily fluid
8
spleen
6
epithelium
6
vasculature
4
pancreas
3
blood vessel
Project
469
AMP
Genome assembly (visualization)
350
GRCh38
341
hg19
Lab
469
AMP-T2D consortium
Audit category:
13
missing controlled_by
Audit category:
26
inconsistent control read length
8
inconsistent control run_type
assay_slims!
DNA accessibility
month_released!
December, 2017
BIOSAMPLE
ASSAY
469 results
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Clear Filters
ChIP-seq
WGBS
cell line
HepG2
359
1
GM12878
15
tissue
layer of hippocampus
19
caudate nucleus
14
middle frontal area 46
13
substantia nigra
13
cingulate gyrus
8
+ See 5 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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