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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
4
total RNA-seq
2
small RNA-seq
1
WGBS
Assay category
DNA accessibility
17
DNA binding
6
Transcription
1
DNA methylation
Target of assay
14
histone
14
histone modification
8
broad histone mark
6
narrow histone mark
3
control
Date released
10
June, 2019
7
May, 2019
5
July, 2019
2
March, 2020
Available data
34
bigWig
27
bed narrowPeak
24
bam
15
tagAlign
14
bigBed narrowPeak
13
bed broadPeak
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
Organism
24
Homo sapiens
Biosample type
12
primary cell
12
tissue
Organ
673
liver
614
pancreas
579
connective tissue
437
adipose tissue
275
epithelium
208
brain
169
heart
162
vasculature
159
blood vessel
88
artery
70
limb
64
kidney
60
blood
60
bodily fluid
58
bone element
39
nerve
36
embryo
24
musculature of body
22
spleen
17
vein
3
eye
1
pericardium
1
pituitary gland
0
lymph node
Project
24
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
Lab
24
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
24 results
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Clear Filters
ChIP-seq
total RNA-seq
small RNA-seq
WGBS
primary cell
skeletal muscle satellite cell
8
1
1
skeletal muscle cell
2
tissue
muscle of leg
7
1
psoas muscle
2
skeletal muscle tissue
1
1
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