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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
2
Capture-C
2
pCHi-C
Assay category
9
DNA binding
DNA accessibility
Target of assay
9
control
Date released
5
December, 2017
2
August, 2017
2
August, 2021
2
February, 2021
2
September, 2017
Available data
2996
bam
bigWig
1586
tsv
1319
bed narrowPeak
1249
fastq
795
bigBed narrowPeak
391
tagAlign
156
txt
108
bed broadPeak
93
zippedFastqFolder
79
bigBed broadPeak
64
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
13
Homo sapiens
Biosample type
7
in vitro differentiated cells
3
tissue
1
cell line
1
primary cell
1
stem cell
Organ
4
connective tissue
2
liver
2
pancreas
1
embryo
Project
13
AMP
Genome assembly (visualization)
13
hg19
9
GRCh38
Lab
11
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
assay_slims!
DNA accessibility
files.file_type!
bigWig
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
Capture-C
pCHi-C
in vitro differentiated cells
adipocyte
1
1
Posterior foregut
1
definitive endodermal cell
1
osteoblast
1
pancreatic endoderm
1
+ See 1 more…
tissue
islet of Langerhans
2
liver
1
cell line
HepG2
1
primary cell
osteoblast
1
stem cell
hESC
1
See all biosamples
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