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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
17
WGBS
Assay category
36
DNA methylation
DNA accessibility
Date released
23
July, 2019
7
November, 2018
6
August, 2017
Available data
2817
bam
2604
bigWig
1490
tsv
1250
fastq
1211
bed narrowPeak
801
bigBed narrowPeak
314
tagAlign
151
txt
114
bed broadPeak
93
zippedFastqFolder
79
bigBed broadPeak
62
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
csv
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
0
bed bed3
Organism
36
Homo sapiens
Biosample type
25
tissue
10
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
36
AMP
Genome assembly (visualization)
19
hg19
17
GRCh38
Lab
36
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA accessibility
files.file_type!
csv
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
36 results
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Clear Filters
RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
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