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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
17
WGBS
Assay category
36
DNA methylation
Date released
23
July, 2019
7
November, 2018
6
August, 2017
Available data
2914
bam
2731
bigWig
1586
tsv
1237
bed narrowPeak
1174
fastq
720
bigBed narrowPeak
398
tagAlign
157
txt
114
bed broadPeak
93
zippedFastqFolder
bigBed broadPeak
64
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
3
cool
3
tar
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
36
Homo sapiens
Biosample type
25
tissue
10
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
36
AMP
Genome assembly (visualization)
19
hg19
17
GRCh38
Lab
36
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA accessibility
files.file_type!
bigBed broadPeak
ibed
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
36 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
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