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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
8
WGBS
Assay category
23
DNA methylation
Date released
23
July, 2019
Available data
3003
bam
2819
bigWig
tsv
1325
bed narrowPeak
fastq
801
bigBed narrowPeak
398
tagAlign
157
txt
114
bed broadPeak
93
zippedFastqFolder
79
bigBed broadPeak
64
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
23
Homo sapiens
Biosample type
14
tissue
9
primary cell
Organ
8
heart
6
epithelium
4
kidney
2
brain
2
musculature of body
2
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
eye
1
limb
1
liver
1
pericardium
Project
23
AMP
Genome assembly (visualization)
15
hg19
8
GRCh38
Lab
23
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA accessibility
files.file_type!
fastq
tsv
month_released!
April, 2020
BIOSAMPLE
ASSAY
23 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
heart right ventricle
2
aorta
1
brain
1
heart
1
+ See 6 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
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