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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
RRBS
15
WGBS
Assay category
33
DNA methylation
Date released
22
July, 2019
7
November, 2018
4
August, 2017
Available data
2424
bam
2267
bigWig
1267
bed narrowPeak
1159
fastq
1107
tsv
786
bigBed narrowPeak
376
tagAlign
157
txt
113
bed broadPeak
93
zippedFastqFolder
79
bigBed broadPeak
49
bed bed3+
33
bed bedMethyl
33
bigBed bedMethyl
23
hic
22
bedpe bed3+
8
csv
4
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
33
Homo sapiens
Biosample type
23
tissue
9
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
33
AMP
Genome assembly (visualization)
18
hg19
15
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA accessibility
organ_slims!
connective tissue
large intestine
BIOSAMPLE
ASSAY
33 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
body of pancreas
2
heart right ventricle
2
skeletal muscle tissue
2
+ See 10 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 4 more…
cell line
HepG2
1
See all biosamples
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