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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
ChIP-seq
Assay category
DNA accessibility
106
DNA binding
Target of assay
90
histone
90
histone modification
53
broad histone mark
37
narrow histone mark
16
transcription factor
6
RNA binding protein
Date released
40
May, 2024
30
May, 2021
20
August, 2017
14
August, 2021
1
April, 2019
1
November, 2017
Available data
bam
2679
bigWig
1518
tsv
1250
bed narrowPeak
1250
fastq
730
bigBed narrowPeak
392
tagAlign
157
txt
108
bed broadPeak
93
zippedFastqFolder
73
bigBed broadPeak
62
bed bed3+
34
bed bedMethyl
34
bigBed bedMethyl
bedpe bed3+
20
hic
8
csv
3
cool
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
106
Homo sapiens
Biosample type
62
tissue
30
primary cell
14
cell line
Organ
41
heart
14
liver
13
musculature of body
6
pancreas
1
adipose tissue
1
brain
1
connective tissue
Project
106
AMP
Genome assembly (visualization)
66
hg19
40
GRCh38
Lab
40
Patrick T. Ellinor, Broad
30
Kyle Gaulton, UCSD
22
AMP-T2D consortium
14
Bing Ren, UCSD
assay_slims!
DNA accessibility
files.file_type!
bam
bedpe bed3+
organ_slims!
vasculature
BIOSAMPLE
ASSAY
106 results
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Clear Filters
ChIP-seq
tissue
left cardiac atrium
40
skeletal muscle tissue
13
islet of Langerhans
6
cingulate gyrus
1
heart left ventricle
1
+ See 1 more…
primary cell
CD8-positive, alpha-beta T cell
30
cell line
HepG2
14
See all biosamples
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