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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
RRBS
17
WGBS
Assay category
35
DNA methylation
Date released
22
July, 2019
7
November, 2018
6
August, 2017
Available data
2610
bam
2484
bigWig
1585
tsv
1012
bed narrowPeak
932
fastq
489
bigBed narrowPeak
320
tagAlign
157
txt
93
zippedFastqFolder
64
bed bed3+
44
bed broadPeak
35
bed bedMethyl
35
bigBed bedMethyl
23
bedpe bed3+
23
hic
15
bigBed broadPeak
8
csv
5
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
35
Homo sapiens
Biosample type
24
tissue
10
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
pericardium
Project
35
AMP
Genome assembly (visualization)
18
hg19
17
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA accessibility
month_released!
November, 2017
organ_slims!
pericardium
BIOSAMPLE
ASSAY
35 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
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