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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
13
WGBS
Assay category
30
DNA methylation
Date released
21
July, 2019
6
August, 2017
3
November, 2018
Available data
2389
bam
2247
bigWig
1185
bed narrowPeak
1169
tsv
846
fastq
742
bigBed narrowPeak
379
tagAlign
151
txt
102
bed broadPeak
79
bigBed broadPeak
52
zippedFastqFolder
42
bed bed3+
30
bed bedMethyl
30
bigBed bedMethyl
16
bedpe bed3+
16
hic
8
csv
4
hdf5
3
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
30
Homo sapiens
Biosample type
19
tissue
10
primary cell
1
cell line
Organ
8
heart
6
epithelium
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
30
AMP
Genome assembly (visualization)
17
hg19
13
GRCh38
Lab
30
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA accessibility
organ_slims!
gonad
pancreas
stomach
BIOSAMPLE
ASSAY
30 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
adipose tissue
2
heart right ventricle
2
skeletal muscle tissue
2
spleen
2
+ See 8 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
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