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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
Assay category
61
DNA binding
DNA accessibility
Target of assay
56
histone
56
histone modification
36
broad histone mark
20
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
39
May, 2019
18
October, 2019
4
November, 2017
Available data
145
bam
128
bigWig
68
tsv
65
bed narrowPeak
61
bigBed narrowPeak
6
fastq
6
tagAlign
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
2
hdf5
1
bedpe bed3+
1
hic
Organism
61
Homo sapiens
Biosample type
57
tissue
4
primary cell
Organ
352
liver
94
brain
71
vasculature
69
blood vessel
64
heart
59
pancreas
54
blood
54
bodily fluid
48
limb
36
epithelium
24
kidney
24
nerve
21
artery
15
connective tissue
14
musculature of body
12
spleen
vein
6
adipose tissue
2
eye
Project
61
AMP
Genome assembly (visualization)
61
GRCh38
61
hg19
Lab
61
AMP-T2D consortium
assay_slims!
DNA accessibility
files.file_type!
bed bed3
organ_slims!
vein
BIOSAMPLE
ASSAY
61 results
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ChIP-seq
tissue
tibial artery
18
ascending aorta
13
thoracic aorta
12
aorta
11
coronary artery
3
primary cell
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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