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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
334
ChIP-seq
Assay category
334
DNA binding
Target of assay
240
transcription factor
75
histone
75
histone modification
66
recombinant protein
45
broad histone mark
35
RNA binding protein
30
narrow histone mark
16
control
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
550
February, 2021
334
November, 2017
298
May, 2021
260
August, 2017
215
May, 2020
193
October, 2019
164
July, 2018
97
May, 2019
72
December, 2017
69
July, 2019
65
April, 2019
63
November, 2018
58
September, 2018
49
April, 2018
47
October, 2018
45
August, 2021
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
23
June, 2019
16
March, 2020
6
October, 2017
5
December, 2019
5
January, 2018
4
November, 2020
3
August, 2018
3
June, 2018
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
334
Homo sapiens
Biosample type
268
cell line
57
tissue
9
primary cell
Organ
268
liver
66
brain
6
epithelium
6
vasculature
3
blood vessel
Project
334
AMP
Genome assembly (visualization)
281
hg19
279
GRCh38
Lab
334
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
assay_slims!
DNA accessibility
files.file_type!
bed bedMethyl
BIOSAMPLE
ASSAY
334 results
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Clear Filters
ChIP-seq
cell line
HepG2
268
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
+ See 1 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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