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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
317
ChIP-seq
Assay category
317
DNA binding
Target of assay
245
transcription factor
66
recombinant protein
54
histone
54
histone modification
40
RNA binding protein
29
broad histone mark
25
narrow histone mark
15
chromatin remodeller
15
control
2
other context
2
other post-translational modification
Date released
545
February, 2021
277
November, 2017
224
August, 2017
209
May, 2021
188
May, 2020
164
July, 2018
153
October, 2019
97
May, 2019
77
July, 2019
72
December, 2017
70
November, 2018
65
April, 2019
58
September, 2018
49
April, 2018
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
29
August, 2021
26
January, 2019
23
June, 2019
16
March, 2020
5
December, 2019
5
January, 2018
4
November, 2020
3
August, 2018
3
June, 2018
Available data
392
bam
374
bigWig
353
bed narrowPeak
324
fastq
312
bigBed narrowPeak
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
317
Homo sapiens
Biosample type
256
cell line
52
tissue
9
primary cell
Organ
256
liver
40
heart
21
brain
6
epithelium
6
vasculature
3
blood vessel
Project
317
AMP
Genome assembly (visualization)
266
GRCh38
263
hg19
Lab
277
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
10
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
assay_slims!
DNA accessibility
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
317 results
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Clear Filters
ChIP-seq
cell line
HepG2
256
tissue
left cardiac atrium
40
layer of hippocampus
6
middle frontal area 46
5
cerebellum (Hemisphere)
1
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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