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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
7
WGBS
1
single cell RNA-seq
Assay category
70
DNA binding
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
321
November, 2017
278
August, 2017
94
December, 2017
78
November, 2018
76
February, 2023
60
October, 2018
59
September, 2018
50
July, 2018
44
April, 2018
39
February, 2018
38
September, 2020
35
December, 2018
30
January, 2019
18
February, 2021
9
October, 2017
6
May, 2022
6
September, 2017
5
January, 2018
4
August, 2018
3
June, 2018
Available data
78
fastq
77
bam
70
bigWig
63
bed narrowPeak
63
bigBed narrowPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
78
Homo sapiens
Biosample type
61
cell line
16
tissue
1
primary cell
Organ
50
liver
15
blood
15
bodily fluid
8
spleen
4
pancreas
Project
78
AMP
Genome assembly (visualization)
70
GRCh38
61
hg19
Lab
78
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_slims!
DNA accessibility
files.file_type!
hdf5
tar
BIOSAMPLE
ASSAY
78 results
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Clear Filters
ChIP-seq
WGBS
single cell RNA-seq
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
2
liver
4
body of pancreas
2
pancreas
2
primary cell
pancreatic cell
1
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