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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
4
total RNA-seq
1
GRO-seq
Assay category
15
DNA binding
4
Transcription
Target of assay
12
histone
12
histone modification
8
narrow histone mark
control
4
broad histone mark
3
transcription factor
Date released
10
February, 2018
9
December, 2017
1
January, 2018
Available data
29
bam
29
bigWig
20
fastq
14
bed narrowPeak
14
tsv
2
bed bed3+
Organism
20
Homo sapiens
Biosample type
20
in vitro differentiated cells
Organ
365
liver
232
pancreas
194
epithelium
54
blood
54
bodily fluid
20
embryo
14
spleen
13
brain
9
connective tissue
6
adipose tissue
4
vasculature
2
blood vessel
Project
20
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
1
hg18
Lab
20
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
3
inconsistent control read length
assay_slims!
DNA accessibility
month_released!
August, 2017
target.investigated_as!
control
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
13
4
1
Hepatic endoderm
2
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