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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
59
total RNA-seq
13
single cell RNA-seq
1
MPRA
Assay category
72
Transcription
DNA accessibility
Date released
89
February, 2021
57
August, 2021
6
May, 2022
4
February, 2023
1
October, 2022
Available data
2330
bam
2218
bigWig
1412
tsv
912
bed narrowPeak
790
fastq
449
bigBed narrowPeak
312
tagAlign
157
txt
93
zippedFastqFolder
56
bed bed3+
56
bed broadPeak
33
bed bedMethyl
bigBed bedMethyl
21
bedpe bed3+
21
bigBed broadPeak
21
hic
7
csv
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
156
Homo sapiens
Biosample type
156
tissue
1
cell line
Organ
88
bone element
62
kidney
6
pancreas
4
skeleton
Project
157
AMP
Lab
94
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
5
audit script error
assay_slims!
DNA accessibility
files.file_type!
bigBed bedMethyl
month_released!
January, 2018
organ_slims!
liver
BIOSAMPLE
ASSAY
157 results
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RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
tissue
bone element
84
kidney
49
13
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
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cell line
MIN6
1
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