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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
53
total RNA-seq
13
single cell RNA-seq
1
MPRA
Assay category
66
Transcription
DNA accessibility
Date released
89
February, 2021
57
August, 2021
4
February, 2023
1
October, 2022
Available data
2883
bam
2722
bigWig
1586
tsv
fastq
1228
bed narrowPeak
704
bigBed narrowPeak
398
tagAlign
157
txt
114
bed broadPeak
93
zippedFastqFolder
79
bigBed broadPeak
64
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
vcf
Organism
150
Homo sapiens
Biosample type
150
tissue
1
cell line
Organ
88
bone element
62
kidney
4
skeleton
Project
151
AMP
Lab
94
AMP-T2D consortium
57
Katalin Susztak, Upenn
Audit category:
84
inconsistent ontology term
5
audit script error
assay_slims!
DNA accessibility
files.file_type!
fastq
vcf
month_released!
May, 2019
BIOSAMPLE
ASSAY
151 results
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RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
tissue
bone element
84
kidney
49
13
acetabular part of hip bone
1
ilium
1
ischium
1
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cell line
MIN6
1
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