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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
59
total RNA-seq
13
single cell RNA-seq
1
MPRA
Assay category
72
Transcription
DNA accessibility
Date released
89
February, 2021
57
August, 2021
6
May, 2022
4
February, 2023
1
October, 2022
Available data
2424
bam
2267
bigWig
1267
bed narrowPeak
1159
fastq
1107
tsv
786
bigBed narrowPeak
376
tagAlign
157
txt
113
bed broadPeak
93
zippedFastqFolder
79
bigBed broadPeak
49
bed bed3+
33
bed bedMethyl
33
bigBed bedMethyl
23
hic
22
bedpe bed3+
8
csv
4
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
156
Homo sapiens
Biosample type
156
tissue
1
cell line
Organ
88
bone element
62
kidney
6
pancreas
4
skeleton
Project
157
AMP
Lab
94
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
5
audit script error
assay_slims!
DNA accessibility
organ_slims!
connective tissue
large intestine
BIOSAMPLE
ASSAY
157 results
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RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
tissue
bone element
84
kidney
49
13
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
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cell line
MIN6
1
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