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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
23
single cell RNA-seq
22
total RNA-seq
1
pCHi-C
Assay category
77
DNA binding
45
Transcription
DNA accessibility
Target of assay
56
transcription factor
18
control
12
RNA binding protein
1
chromatin remodeller
Date released
38
September, 2020
29
December, 2018
20
October, 2018
10
November, 2017
8
November, 2018
6
January, 2019
6
May, 2022
4
December, 2017
1
August, 2018
1
July, 2018
Available data
123
fastq
84
bam
60
bigWig
59
bed narrowPeak
59
bigBed narrowPeak
6
txt
1
bedpe bed3+
1
tsv
1
zippedFastqFolder
Organism
123
Homo sapiens
Biosample type
46
cell line
39
primary cell
37
tissue
1
in vitro differentiated cells
Organ
35
blood
35
bodily fluid
34
pancreas
17
epithelium
15
liver
10
adipose tissue
10
connective tissue
7
spleen
Project
85
AMP
38
HPAP
Genome assembly (visualization)
60
GRCh38
60
hg19
Lab
79
AMP-T2D consortium
38
Klaus Kaestner, Upenn
6
Kyle Gaulton, UCSD
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
123 results
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ChIP-seq
single cell RNA-seq
total RNA-seq
pCHi-C
cell line
GM12878
35
HepG2
11
primary cell
Langerhans cell
22
pancreatic alpha cell
1
15
pancreatic beta cell
1
tissue
body of pancreas
11
spleen
7
islet of Langerhans
6
omental fat pad
6
right lobe of liver
4
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in vitro differentiated cells
white fat cell
1
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