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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
6
total RNA-seq
1
RRBS
1
pCHi-C
Assay category
35
DNA binding
6
Transcription
DNA accessibility
1
DNA methylation
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
39
October, 2019
2
July, 2019
1
February, 2020
1
March, 2020
Available data
40
bam
29
bigWig
24
bed narrowPeak
24
bigBed narrowPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
43
Homo sapiens
Biosample type
42
tissue
1
primary cell
Organ
770
pancreas
731
liver
650
connective tissue
483
adipose tissue
401
epithelium
316
heart
249
brain
189
kidney
178
vasculature
174
blood vessel
147
bone element
92
artery
78
limb
61
musculature of body
60
blood
60
bodily fluid
40
nerve
37
embryo
29
eye
23
spleen
19
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
43
AMP
Genome assembly (visualization)
30
hg19
29
GRCh38
Lab
43
AMP-T2D consortium
assay_slims!
DNA accessibility
lab.title!
Bing Ren, UCSD
BIOSAMPLE
ASSAY
43 results
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Clear Filters
ChIP-seq
total RNA-seq
RRBS
pCHi-C
tissue
tibial nerve
35
5
adrenal gland
1
pericardium
1
primary cell
pericardium fibroblast
1
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