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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
35
ChIP-seq
1
pCHi-C
Assay category
DNA accessibility
190
Transcription
35
DNA binding
Target of assay
histone
46
histone modification
38
narrow histone mark
31
control
8
broad histone mark
4
RNA binding protein
4
transcription factor
Date released
666
February, 2021
318
November, 2017
225
May, 2021
217
August, 2021
214
May, 2020
202
August, 2017
168
July, 2018
100
February, 2023
100
July, 2019
85
October, 2019
81
May, 2022
78
November, 2018
63
December, 2017
57
March, 2020
56
September, 2020
49
April, 2018
47
September, 2023
46
October, 2018
35
December, 2018
28
May, 2019
27
September, 2018
25
February, 2020
25
November, 2019
23
February, 2018
23
January, 2019
20
April, 2019
14
November, 2020
12
June, 2019
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
5
May, 2024
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
3
October, 2017
1
March, 2019
Available data
223
bam
192
bigWig
189
tsv
23
tagAlign
4
bed narrowPeak
4
bigBed narrowPeak
Organism
226
Homo sapiens
Biosample type
166
tissue
59
primary cell
1
cell line
Organ
167
liver
4
connective tissue
4
epithelium
3
heart
2
eye
2
kidney
2
musculature of body
Project
181
AMP
45
T1D
Genome assembly (visualization)
192
GRCh38
192
hg19
Lab
181
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
10
inconsistent ontology term
assay_slims!
DNA accessibility
lab.title!
Karen Mohlke, UNC
target.investigated_as!
histone
BIOSAMPLE
ASSAY
226 results
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Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
tissue
liver
143
23
primary cell
cardiac fibroblast
3
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
+ See 29 more…
cell line
HepG2
1
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