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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
total RNA-seq
11
ChIP-seq
2
single cell RNA-seq
Assay category
57
Transcription
DNA accessibility
11
DNA binding
Target of assay
5
transcription factor
4
control
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
Date released
58
February, 2021
5
May, 2019
2
August, 2021
2
July, 2019
1
February, 2020
Available data
65
bam
61
bigWig
57
tsv
7
bed narrowPeak
6
tagAlign
3
bigBed narrowPeak
Organism
68
Homo sapiens
Biosample type
58
cell line
8
tissue
2
primary cell
Organ
762
liver
715
pancreas
650
connective tissue
483
adipose tissue
354
epithelium
316
heart
249
brain
191
kidney
178
vasculature
174
blood vessel
147
bone element
92
artery
limb
61
musculature of body
60
blood
60
bodily fluid
40
nerve
37
embryo
29
eye
23
spleen
19
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
68
AMP
Genome assembly (visualization)
61
GRCh38
61
hg19
Lab
68
AMP-T2D consortium
assay_slims!
DNA accessibility
lab.title!
Mark McCarthy, Oxford
month_released!
September, 2018
organ_slims!
limb
BIOSAMPLE
ASSAY
68 results
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total RNA-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
6
tissue
coronary artery
1
5
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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