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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
23
ChIP-seq
1
pCHi-C
Assay category
190
Transcription
DNA accessibility
23
DNA binding
Target of assay
27
histone
histone modification
27
narrow histone mark
23
control
Date released
666
February, 2021
318
November, 2017
225
May, 2021
215
August, 2021
214
May, 2020
201
August, 2017
168
July, 2018
101
May, 2022
100
February, 2023
100
July, 2019
85
October, 2019
63
December, 2017
63
November, 2018
57
March, 2020
56
September, 2020
49
April, 2018
47
September, 2023
46
October, 2018
28
May, 2019
27
September, 2018
25
February, 2020
25
November, 2019
23
February, 2018
20
April, 2019
14
November, 2020
12
June, 2019
10
December, 2019
9
April, 2020
8
December, 2018
6
January, 2019
6
September, 2017
5
January, 2018
5
March, 2023
5
May, 2024
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
3
October, 2017
1
March, 2019
Available data
211
bam
189
tsv
188
bigWig
23
tagAlign
Organism
214
Homo sapiens
Biosample type
166
tissue
47
primary cell
1
cell line
Organ
167
liver
Project
169
AMP
45
T1D
Genome assembly (visualization)
188
GRCh38
188
hg19
Lab
169
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
assay_slims!
DNA accessibility
lab.title!
Struan F.A. Grant, CHOP
organ_slims!
blood
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
214 results
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Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
tissue
liver
143
23
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 22 more…
cell line
HepG2
1
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