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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
1
Hi-C
Assay category
DNA accessibility
65
DNA binding
1
3D chromatin structure
Target of assay
32
transcription factor
19
histone
19
histone modification
12
control
11
narrow histone mark
8
broad histone mark
6
RNA binding protein
2
chromatin remodeller
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
65
bam
53
bed narrowPeak
53
bigBed narrowPeak
53
bigWig
35
fastq
Organism
66
Homo sapiens
Biosample type
31
primary cell
28
cell line
7
tissue
Organ
27
blood
27
bodily fluid
12
connective tissue
10
musculature of body
7
spleen
6
epithelium
5
heart
3
eye
3
kidney
1
liver
Project
66
AMP
Genome assembly (visualization)
53
GRCh38
53
hg19
Lab
66
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
1
inconsistent control
assay_slims!
DNA accessibility
month_released!
May, 2020
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
Hi-C
primary cell
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac fibroblast
5
cardiac muscle cell
3
epithelial cell of proximal tubule
3
+ See 2 more…
cell line
GM12878
27
HepG2
1
tissue
spleen
7
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