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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
94
Transcription
DNA accessibility
Date released
608
February, 2021
406
November, 2017
400
August, 2017
364
May, 2021
258
October, 2019
241
May, 2020
235
August, 2021
168
July, 2018
115
May, 2019
101
May, 2022
100
February, 2023
98
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
59
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
23
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
76
fastq
4
tsv
4
txt
Organism
99
Homo sapiens
Biosample type
76
primary cell
14
tissue
6
cell line
4
in vitro differentiated cells
Organ
43
pancreas
40
epithelium
4
bone element
4
connective tissue
4
eye
4
skeleton
1
heart
Project
76
HPAP
14
AMP
10
T1D
Lab
76
Klaus Kaestner, Upenn
14
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
assay_slims!
DNA accessibility
organ_slims!
artery
thymus
BIOSAMPLE
ASSAY
100 results
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Clear Filters
total RNA-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
CRISPR genome editing followed by sgRNA sequencing
single cell RNA-seq
primary cell
exocrine cell
39
pancreatic alpha cell
27
pancreatic beta cell
10
tissue
islet of Langerhans
5
pigmented layer of retina
2
retina
2
acetabular part of hip bone
1
heart
1
+ See 3 more…
cell line
EndoC_BH1
3
2
1
in vitro differentiated cells
immature adipocyte
2
adipocyte
1
preadipocyte
1
See all biosamples
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