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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 93total RNA-seq
  • 3CRISPR genome editing followed by DNA sequencing
  • 2HiChIP
  • 1CRISPR genome editing followed by sgRNA sequencing
  • 1single cell RNA-seq
Assay category
  • DNA accessibility
  • 94Transcription
Date released
  • 666February, 2021
  • 406November, 2017
  • 400August, 2017
  • 365May, 2021
  • 281October, 2019
  • 241May, 2020
  • 237August, 2021
  • 168July, 2018
  • 120May, 2019
  • 101May, 2022
  • 100February, 2023
  • 100July, 2019
  • 94December, 2017
  • 80April, 2019
  • 78November, 2018
  • 76October, 2018
  • 60March, 2020
  • 59September, 2018
  • 56September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 35November, 2019
  • 31June, 2019
  • 30January, 2019
  • 25February, 2020
  • 15October, 2017
  • 14November, 2020
  • 10December, 2019
  • 9April, 2020
  • 6September, 2017
  • 5January, 2018
  • 5March, 2023
  • 4August, 2018
  • 4May, 2023
  • 4October, 2022
  • 3June, 2018
  • 1March, 2019
Available data
  • 76fastq
  • 4tsv
  • 4txt
Organism
  • 99Homo sapiens
Biosample type
  • 76primary cell
  • 14tissue
  • 6cell line
  • 4in vitro differentiated cells
Organ
  • 43pancreas
  • 40epithelium
  • 4bone element
  • 4connective tissue
  • 4eye
  • 4skeleton
  • 1heart
Project
  • 76HPAP
  • 14AMP
  • 10T1D
Lab
  • 76Klaus Kaestner, Upenn
  • 14AMP-T2D consortium
  • 10Kyle Gaulton, UCSD
Audit category:
  • 2inconsistent ontology term
assay_slims!
  • DNA accessibility
BIOSAMPLE
ASSAY

100 results

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Clear Filters
total RNA-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
CRISPR genome editing followed by sgRNA sequencing
single cell RNA-seq
primary cell
exocrine cell39
pancreatic alpha cell27
pancreatic beta cell10
tissue
islet of Langerhans5
pigmented layer of retina2
retina2
acetabular part of hip bone1
heart1
cell line
EndoC_BH1321
in vitro differentiated cells
immature adipocyte2
adipocyte1
preadipocyte1
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