Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ChIP-seq
5
total RNA-seq
Assay category
DNA accessibility
62
DNA binding
5
Transcription
Target of assay
26
histone
26
histone modification
18
control
18
transcription factor
14
narrow histone mark
12
broad histone mark
10
RNA binding protein
6
chromatin remodeller
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
67
bam
49
bigWig
44
bed narrowPeak
44
bigBed narrowPeak
36
fastq
5
tsv
2
bed bed3+
Organism
67
Homo sapiens
Biosample type
31
primary cell
23
cell line
13
tissue
Organ
18
blood
18
bodily fluid
12
connective tissue
10
musculature of body
7
spleen
6
epithelium
6
pancreas
5
heart
5
liver
3
eye
3
kidney
Project
67
AMP
Genome assembly (visualization)
51
GRCh38
51
hg19
Lab
67
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
assay_slims!
DNA accessibility
month_released!
September, 2018
BIOSAMPLE
ASSAY
67 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
primary cell
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac fibroblast
5
cardiac muscle cell
3
epithelial cell of proximal tubule
3
+ See 2 more…
cell line
GM12878
18
HepG2
5
tissue
spleen
7
islet of Langerhans
6
See all biosamples
Download