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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
3
single cell RNA-seq
3
total RNA-seq
Assay category
74
DNA binding
DNA accessibility
6
Transcription
Target of assay
30
histone
30
histone modification
29
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
59
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
76
bam
60
fastq
47
bigWig
45
bed narrowPeak
45
bigBed narrowPeak
2
tsv
Organism
80
Homo sapiens
Biosample type
78
tissue
2
primary cell
Organ
53
pancreas
24
adipose tissue
24
connective tissue
3
kidney
2
epithelium
Project
80
AMP
Genome assembly (visualization)
48
GRCh38
48
hg19
Lab
77
AMP-T2D consortium
3
Katalin Susztak, Upenn
Audit category:
1
inconsistent control read length
assay_slims!
DNA accessibility
month_released!
July, 2018
organ_slims!
small intestine
BIOSAMPLE
ASSAY
80 results
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ChIP-seq
single cell RNA-seq
total RNA-seq
tissue
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
kidney
3
+ See 2 more…
primary cell
pancreatic acinar cell
2
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