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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
total RNA-seq
12
ChIP-seq
2
Hi-C
Assay category
DNA accessibility
20
Transcription
12
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
RNA binding protein
1
transcription factor
Date released
181
August, 2017
July, 2018
58
September, 2018
47
May, 2022
47
October, 2018
45
May, 2021
43
February, 2023
39
April, 2018
34
November, 2019
32
February, 2021
16
September, 2020
14
October, 2019
10
March, 2020
10
November, 2020
6
July, 2019
6
September, 2017
4
August, 2021
4
November, 2018
3
August, 2018
3
October, 2022
2
May, 2019
1
February, 2020
1
June, 2018
1
March, 2019
Available data
32
bam
30
bigWig
20
tsv
10
bed narrowPeak
2
bedpe bed3+
2
hic
Organism
34
Homo sapiens
Biosample type
20
tissue
14
cell line
Organ
34
pancreas
14
epithelium
Project
34
AMP
Genome assembly (visualization)
32
hg19
30
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
14
inconsistent ontology term
assay_slims!
DNA accessibility
month_released!
July, 2018
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
34 results
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total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
1
cell line
EndoC_BH1
1
12
1
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