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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 242ChIP-seq
  • 30total RNA-seq
  • 5Hi-C
  • 4pCHi-C
Assay category
  • 242DNA binding
  • DNA accessibility
  • 30Transcription
  • 53D chromatin structure
Target of assay
  • 196histone
  • 196histone modification
  • 141narrow histone mark
  • 55broad histone mark
  • 39control
  • 7recombinant protein
  • 7transcription factor
Date released
  • 666February, 2021
  • 406November, 2017
  • 400August, 2017
  • 365May, 2021
  • 281October, 2019
  • 241May, 2020
  • 237August, 2021
  • 168July, 2018
  • 120May, 2019
  • 101May, 2022
  • 100February, 2023
  • 100July, 2019
  • 94December, 2017
  • 80April, 2019
  • 78November, 2018
  • 76October, 2018
  • 60March, 2020
  • 59September, 2018
  • 56September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 35November, 2019
  • 31June, 2019
  • 30January, 2019
  • 25February, 2020
  • 15October, 2017
  • 14November, 2020
  • 10December, 2019
  • 9April, 2020
  • 6September, 2017
  • 5January, 2018
  • 5March, 2023
  • 4August, 2018
  • 4May, 2023
  • 4October, 2022
  • 3June, 2018
  • 1March, 2019
Available data
  • 235bam
  • 193bigWig
  • 174bed narrowPeak
  • 58bigBed narrowPeak
  • 49tagAlign
  • 16tsv
  • 4hic
  • 3bedpe bed3+
  • 2bed broadPeak
  • 2bigBed broadPeak
  • 1bed bed3+
  • 1hdf5
  • 1tagAlign bed3+
Organism
  • 281Homo sapiens
Biosample type
  • 222tissue
  • 28cell line
  • 27primary cell
  • 4in vitro differentiated cells
Organ
  • 85brain
  • 63limb
  • 41blood vessel
  • 41vasculature
  • 39nerve
  • 28epithelium
  • 27kidney
  • 23artery
  • 20eye
  • 18vein
  • 14pancreas
  • 8heart
  • 6liver
  • 4gonad
  • 4ovary
  • 1connective tissue
  • 1lymph node
  • 1pituitary gland
Project
  • 281AMP
Genome assembly (visualization)
  • 199hg19
  • 193GRCh38
Lab
  • 281AMP-T2D consortium
Audit category:
  • 19inconsistent ontology term
  • 1audit script error
Audit category:
  • 1inconsistent assembly
assay_slims!
  • DNA accessibility
BIOSAMPLE
ASSAY

281 results

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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
pCHi-C
tissue
islet of Langerhans21144
tibial nerve354
tibial artery23
heart521
brain51
cell line
Panc1131
RCC 7860 HIF1a re-expression41
RCC 7860 HIF2a over-expression31
RCC 7860 vector31
glomerular visceral epithelial cell1
primary cell
endothelial cell of umbilical vein171
epithelial cell of proximal tubule7
kidney glomerular epithelial cell1
kidney tubule cell1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)11
cardiomyocytes (cardiac muscle cell)11
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