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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
total RNA-seq
9
ChIP-seq
2
single cell RNA-seq
Assay category
57
Transcription
DNA accessibility
9
DNA binding
Target of assay
5
transcription factor
4
control
2
histone
2
histone modification
narrow histone mark
1
RNA binding protein
Date released
58
February, 2021
3
May, 2019
2
August, 2021
2
July, 2019
1
February, 2020
Available data
63
bam
59
bigWig
57
tsv
6
tagAlign
5
bed narrowPeak
1
bigBed narrowPeak
Organism
66
Homo sapiens
Biosample type
58
cell line
6
tissue
2
primary cell
Organ
702
liver
700
pancreas
617
connective tissue
471
adipose tissue
352
epithelium
276
heart
176
kidney
152
vasculature
149
blood vessel
147
bone element
132
brain
86
artery
limb
59
blood
59
bodily fluid
48
musculature of body
32
nerve
29
embryo
26
eye
21
spleen
13
vein
10
lung
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
66
AMP
Genome assembly (visualization)
59
GRCh38
59
hg19
Lab
66
AMP-T2D consortium
assay_slims!
DNA accessibility
organ_slims!
limb
pituitary gland
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
66 results
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total RNA-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
6
tissue
coronary artery
1
3
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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