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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
2
WGBS
2
pCHi-C
Assay category
14
DNA binding
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
8
November, 2018
7
December, 2018
2
March, 2020
1
January, 2019
Available data
16
bam
16
fastq
8
bigWig
6
bed narrowPeak
6
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
tsv
Organism
18
Homo sapiens
Biosample type
18
tissue
Organ
659
liver
622
pancreas
572
connective tissue
451
adipose tissue
308
epithelium
219
heart
161
kidney
147
bone element
107
vasculature
104
blood vessel
72
artery
62
brain
59
blood
59
bodily fluid
29
limb
28
musculature of body
26
eye
25
embryo
17
spleen
16
nerve
10
lung
4
skeleton
4
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
18
AMP
Genome assembly (visualization)
8
GRCh38
6
hg19
Lab
18
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA accessibility
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
18 results
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Clear Filters
ChIP-seq
WGBS
pCHi-C
tissue
spleen
14
2
1
gastric (mucosa of stomach)
1
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