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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
DNase-seq
10
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
1
FAIRE-seq
single cell RNA-seq
Assay category
DNA binding
12
DNA accessibility
DNA methylation
4
Transcription
Target of assay
5
control
5
nucleotide modification
Date released
683
February, 2021
291
May, 2020
233
May, 2021
204
February, 2023
187
June, 2019
170
August, 2021
125
May, 2022
120
July, 2018
100
August, 2017
78
July, 2019
72
October, 2019
61
March, 2020
48
November, 2019
40
September, 2018
25
February, 2020
19
September, 2020
16
January, 2021
16
November, 2020
15
February, 2018
12
May, 2023
10
April, 2020
10
November, 2018
8
January, 2018
8
October, 2017
7
August, 2020
7
December, 2019
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
October, 2022
2
October, 2018
1
August, 2018
1
August, 2022
1
December, 2018
Available data
16
bam
15
bigWig
12
bed narrowPeak
11
bigBed narrowPeak
10
bed bed3+
10
bed broadPeak
10
bigBed broadPeak
10
fastq
4
tsv
Organism
26
Homo sapiens
Biosample type
14
tissue
6
cell line
6
primary cell
Organ
13
pancreas
7
connective tissue
6
epithelium
3
liver
2
brain
1
adipose tissue
1
spleen
Project
26
AMP
Genome assembly (visualization)
16
hg19
15
GRCh38
Lab
16
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
assay_slims!
DNA binding
DNA methylation
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
26 results
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Clear Filters
DNase-seq
MeRIP-seq
total RNA-seq
ATAC-seq
FAIRE-seq
tissue
islet of Langerhans
4
body of pancreas
2
brain
2
liver
2
omental fat pad
1
+ See 3 more…
cell line
EndoC_BH1
6
primary cell
osteoblast
1
4
1
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