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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
20
total RNA-seq
2
Hi-C
Assay category
26
DNA accessibility
20
Transcription
DNA binding
2
3D chromatin structure
Date released
707
February, 2021
291
May, 2020
234
May, 2021
205
February, 2023
200
May, 2022
187
June, 2019
168
July, 2018
147
August, 2021
115
August, 2017
108
July, 2019
72
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
1
May, 2023
Available data
46
bam
26
bed narrowPeak
20
bigWig
20
tsv
2
bedpe bed3+
2
hic
Organism
48
Homo sapiens
Biosample type
40
tissue
5
in vitro differentiated cells
3
cell line
Organ
42
pancreas
3
epithelium
1
adipose tissue
1
connective tissue
Project
48
AMP
Genome assembly (visualization)
48
hg19
46
GRCh38
Lab
48
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
assay_slims!
DNA binding
DNA sequencing
lab.title!
Katalin Susztak, Upenn
BIOSAMPLE
ASSAY
48 results
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Clear Filters
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
adipose tissue(adipose white tissue)
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
cell line
EndoC_BH1
1
1
1
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