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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ATAC-seq
17
DNase-seq
Assay category
Transcription
DNA binding
51
DNA accessibility
Date released
14
June, 2019
14
September, 2018
7
August, 2020
5
September, 2017
4
October, 2019
3
August, 2017
3
September, 2020
1
November, 2019
Available data
49
bigWig
41
bam
41
bed narrowPeak
39
bigBed narrowPeak
32
fastq
16
bed bed3+
16
bed broadPeak
16
bigBed broadPeak
Organism
51
Homo sapiens
Biosample type
49
primary cell
2
cell line
Organ
154
kidney
83
heart
72
pancreas
58
vasculature
56
blood vessel
51
epithelium
49
artery
45
limb
34
brain
34
musculature of body
ureter
16
connective tissue
9
liver
8
bone element
8
skeleton
7
adipose tissue
4
eye
4
spleen
3
nerve
2
vein
Project
41
AMP
10
HPAP
Genome assembly (visualization)
64
hg19
51
GRCh38
Lab
41
AMP-T2D consortium
10
Klaus Kaestner, Upenn
Audit category:
3
inconsistent ontology term
assay_slims!
DNA binding
Transcription
organ_slims!
ureter
BIOSAMPLE
ASSAY
51 results
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ATAC-seq
DNase-seq
primary cell
pancreatic alpha cell
13
pancreatic beta cell
10
pancreatic acinar cell
5
pancreatic ductal cell
4
endothelial cell of umbilical vein
2
+ See 13 more…
cell line
EndoC_BH1
1
glomerular visceral epithelial cell
1
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