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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ATAC-seq
17
pCHi-C
1
DNAme array
Assay category
Transcription
DNA binding
34
DNA accessibility
1
DNA methylation
Date released
144
February, 2021
140
May, 2022
111
February, 2023
101
May, 2020
96
August, 2021
52
May, 2021
42
March, 2020
41
July, 2019
30
October, 2019
28
November, 2019
16
August, 2017
16
January, 2021
11
May, 2023
11
November, 2020
10
April, 2020
8
October, 2017
7
August, 2020
7
January, 2018
7
November, 2018
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
March, 2023
Available data
13
bam
13
bed narrowPeak
5
bigWig
Organism
52
Homo sapiens
Biosample type
30
primary cell
16
cell line
5
in vitro differentiated cells
1
tissue
Organ
16
epithelium
16
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
35
AMP
17
T1D
Genome assembly (visualization)
18
hg19
13
GRCh38
Lab
30
AMP-T2D consortium
22
Kyle Gaulton, UCSD
Audit category:
17
inconsistent ontology term
assay_slims!
DNA binding
Transcription
biosample_type!
stem cell
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
52 results
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ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte
13
1
1
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
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cell line
EndoC_BH1
16
in vitro differentiated cells
embryonic stem cell
5
tissue
thymus
1
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