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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
DNase-seq
23
ATAC-seq
1
FAIRE-seq
Assay category
DNA binding
53
DNA accessibility
Date released
24
June, 2019
14
September, 2018
5
August, 2017
5
September, 2017
3
October, 2019
1
February, 2021
1
November, 2020
Available data
115
bam
112
bigWig
101
zippedFastqFolder
69
bed narrowPeak
67
fastq
52
bigBed narrowPeak
32
bed bed3+
28
bed broadPeak
28
bigBed broadPeak
18
tsv
10
bed bedMethyl
10
bigBed bedMethyl
6
hic
4
bedpe bed3+
4
hdf5
3
cool
1
bed bed3
1
tar
Organism
53
Homo sapiens
Biosample type
189
tissue
53
primary cell
8
in vitro differentiated cells
3
cell line
Organ
39
epithelium
22
pancreas
10
kidney
7
connective tissue
7
vasculature
5
blood vessel
5
brain
3
heart
3
vein
2
liver
1
eye
1
musculature of body
Project
53
AMP
Genome assembly (visualization)
50
GRCh38
46
hg19
Lab
53
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
assay_slims!
DNA binding
Transcription
BIOSAMPLE
ASSAY
53 results
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DNase-seq
ATAC-seq
FAIRE-seq
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
cardiac fibroblast
3
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