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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
DNase-seq
10
MeRIP-seq
7
WGBS
4
total RNA-seq
ATAC-seq
1
FAIRE-seq
single cell RNA-seq
Assay category
DNA binding
11
DNA accessibility
7
DNA methylation
4
Transcription
Target of assay
5
control
5
nucleotide modification
Date released
667
February, 2021
200
May, 2021
191
May, 2020
187
June, 2019
120
July, 2018
110
August, 2017
101
February, 2023
99
July, 2019
94
August, 2021
89
May, 2022
57
March, 2020
50
October, 2019
26
September, 2018
25
February, 2020
22
November, 2019
17
November, 2018
16
January, 2021
16
September, 2020
15
February, 2018
15
November, 2020
10
April, 2020
7
December, 2019
5
January, 2018
5
January, 2019
5
March, 2023
4
October, 2022
2
October, 2018
1
August, 2018
1
August, 2022
1
December, 2018
1
March, 2019
1
May, 2023
Available data
22
bam
22
bigWig
17
fastq
11
bed narrowPeak
11
bigBed narrowPeak
10
bed bed3+
10
bed broadPeak
10
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
4
tsv
Organism
32
Homo sapiens
Biosample type
20
tissue
7
cell line
5
primary cell
Organ
17
pancreas
6
connective tissue
6
epithelium
4
liver
3
spleen
2
brain
1
adipose tissue
Project
32
AMP
Genome assembly (visualization)
21
GRCh38
15
hg19
Lab
22
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
assay_slims!
DNA binding
assay_title!
ATAC-seq
single cell RNA-seq
BIOSAMPLE
ASSAY
32 results
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Clear Filters
DNase-seq
MeRIP-seq
WGBS
total RNA-seq
FAIRE-seq
tissue
body of pancreas
2
2
islet of Langerhans
4
pancreas
2
1
spleen
1
2
brain
2
+ See 3 more…
cell line
EndoC_BH1
6
HepG2
1
primary cell
osteoblast
1
4
See all biosamples
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