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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
67
total RNA-seq
ATAC-seq
8
snATAC-seq
2
DNase-seq
1
pCHi-C
Assay category
DNA binding
67
Transcription
10
DNA accessibility
Date released
142
February, 2021
8
January, 2021
6
October, 2019
4
February, 2023
1
February, 2020
1
May, 2021
Available data
88
txt
64
bam
64
bigWig
63
tsv
2
bed bed3+
2
bed broadPeak
2
bed narrowPeak
2
bigBed broadPeak
2
bigBed narrowPeak
Organism
162
Homo sapiens
Biosample type
153
tissue
9
primary cell
Organ
576
pancreas
506
connective tissue
412
adipose tissue
292
epithelium
227
kidney
216
liver
212
heart
147
bone element
88
vasculature
85
blood vessel
64
brain
62
artery
56
musculature of body
48
limb
28
eye
20
lung
18
ureter
15
embryo
8
blood
8
bodily fluid
7
nerve
5
vein
4
skeleton
4
spleen
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
153
AMP
9
T1D
Genome assembly (visualization)
64
GRCh38
64
hg19
Lab
153
AMP-T2D consortium
9
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
assay_slims!
DNA binding
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
162 results
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RNA microarray
total RNA-seq
snATAC-seq
DNase-seq
pCHi-C
tissue
bone element
84
bone tissue
58
tibial nerve
5
2
acetabular part of hip bone
1
ilium
1
+ See 2 more…
primary cell
peripheral blood mononuclear cell
8
megakaryocyte
1
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