Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
DNase-seq
4
ATAC-seq
Assay category
17
DNA accessibility
DNA binding
Date released
10
June, 2019
3
October, 2019
2
August, 2017
1
November, 2018
1
November, 2020
Available data
499
bigWig
495
bam
483
tsv
48
bed narrowPeak
20
bed bed3+
17
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
11
fastq
6
bed bed3
4
bed bedMethyl
4
bed bedgraph
4
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
17
Homo sapiens
Biosample type
7
primary cell
7
tissue
3
in vitro differentiated cells
Organ
80
kidney
40
epithelium
36
limb
33
brain
33
musculature of body
32
pancreas
30
heart
18
ureter
13
connective tissue
12
vasculature
10
blood vessel
6
liver
4
adipose tissue
4
artery
4
eye
3
vein
2
nerve
1
spleen
Project
17
AMP
Genome assembly (visualization)
16
hg19
14
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
assay_title!
CRISPR genome editing followed by DNA sequencing
BIOSAMPLE
ASSAY
17 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ATAC-seq
primary cell
cardiac fibroblast
3
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
retinal pigment epithelial cell
1
tissue
retina
3
omental fat pad
2
adipose tissue
1
subcutaneous adipose tissue
1
in vitro differentiated cells
adipocyte
1
2
Download