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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
single cell RNA-seq
3
pCHi-C
3
total RNA-seq
2
Hi-C
2
RRBS
2
WGBS
Assay category
96
Transcription
DNA binding
4
DNA methylation
2
3D chromatin structure
Date released
92
August, 2021
5
March, 2020
4
July, 2019
3
February, 2020
1
February, 2023
October, 2019
Available data
98
tsv
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hic
Organism
105
Homo sapiens
Biosample type
104
tissue
1
primary cell
Organ
246
pancreas
193
epithelium
134
kidney
105
heart
93
bone element
68
liver
37
connective tissue
33
eye
21
brain
20
lung
17
musculature of body
16
vasculature
15
blood vessel
11
adipose tissue
9
blood
9
bodily fluid
8
skeleton
7
limb
4
artery
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
1
vein
Project
105
AMP
Genome assembly (visualization)
GRCh38
111
hg19
Lab
105
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
assay_title!
CRISPR genome editing followed by sgRNA sequencing
assembly!
GRCh38
month_released!
October, 2019
BIOSAMPLE
ASSAY
105 results
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single cell RNA-seq
pCHi-C
total RNA-seq
Hi-C
RRBS
WGBS
tissue
heart left ventricle
18
1
1
1
2
heart right ventricle
17
1
1
right cardiac atrium
18
1
left cardiac atrium
18
aortic valve
4
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primary cell
cardiac fibroblast
1
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