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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
DNase-seq
27
ATAC-seq
5
FAIRE-seq
Assay category
DNA binding
32
DNA accessibility
Date released
14
September, 2018
6
August, 2017
5
September, 2017
4
October, 2019
2
July, 2019
1
November, 2018
Available data
1605
bam
1595
tsv
1570
bigWig
489
fastq
256
bed narrowPeak
161
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
32
bigBed narrowPeak
23
bedpe bed3+
23
hic
14
bed bed3+
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
bed broadPeak
2
ibed
1
bedpe
1
tar
1
vcf
Organism
32
Homo sapiens
Biosample type
23
primary cell
7
tissue
2
in vitro differentiated cells
Organ
24
pancreas
23
epithelium
4
connective tissue
2
adipose tissue
1
blood vessel
1
brain
1
kidney
1
liver
1
vasculature
1
vein
Project
32
AMP
Genome assembly (visualization)
32
hg19
24
GRCh38
Lab
32
AMP-T2D consortium
assay_slims!
DNA binding
assay_title!
Capture-C
DNase-seq
organ_slims!
eye
BIOSAMPLE
ASSAY
32 results
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ATAC-seq
FAIRE-seq
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
endothelial cell of umbilical vein
1
tissue
adipose tissue
1
frontal cortex
1
islet of Langerhans
1
kidney
1
pancreas
1
+ See 2 more…
in vitro differentiated cells
adipocyte
2
See all biosamples
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