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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
WGBS
3
ATAC-seq
3
total RNA-seq
2
pCHi-C
1
RNA microarray
Assay category
DNA binding
4
DNA methylation
3
DNA accessibility
3
Transcription
Date released
4
August, 2017
2
February, 2020
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
March, 2020
1
May, 2023
1
October, 2019
Available data
406
bigWig
bam
401
tsv
7
fastq
6
bed narrowPeak
4
bigBed narrowPeak
2
bed bed3+
2
bed bedMethyl
2
bed broadPeak
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
12
Homo sapiens
Biosample type
12
tissue
1
in vitro differentiated cells
Organ
228
pancreas
207
kidney
199
epithelium
138
heart
93
bone element
62
liver
52
eye
46
vasculature
45
blood vessel
39
artery
39
connective tissue
20
lung
18
brain
13
adipose tissue
11
musculature of body
9
blood
9
bodily fluid
8
skeleton
3
limb
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
13
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
13
AMP-T2D consortium
assay_slims!
DNA binding
assay_title!
Hi-C
STARR-seq
files.file_type!
bam
BIOSAMPLE
ASSAY
13 results
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Clear Filters
WGBS
ATAC-seq
total RNA-seq
pCHi-C
RNA microarray
tissue
adipose tissue
1
3
1
1
subcutaneous abdominal adipose tissue
3
subcutaneous adipose tissue
1
1
omental fat pad
1
in vitro differentiated cells
white fat cell
1
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