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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
2
pCHi-C
2
total RNA-seq
1
DNase-seq
1
RRBS
Assay category
DNA binding
4
DNA accessibility
2
Transcription
1
DNA methylation
Date released
4
February, 2023
2
March, 2020
1
July, 2019
1
June, 2019
1
November, 2019
Available data
3
bed bed3+
2
bam
2
bed narrowPeak
2
tsv
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
1
bigBed narrowPeak
1
bigWig
Organism
9
Homo sapiens
Biosample type
4
in vitro differentiated cells
2
primary cell
2
tissue
1
stem cell
Organ
84
bone element
65
epithelium
65
pancreas
8
connective tissue
7
kidney
2
embryo
2
heart
1
adipose tissue
1
brain
1
limb
1
liver
1
musculature of body
1
stomach
1
urinary bladder
1
vasculature
Project
9
AMP
Genome assembly (visualization)
5
hg19
2
GRCh38
Lab
9
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
assay_slims!
DNA binding
assay_title!
Hi-C
BIOSAMPLE
ASSAY
9 results
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ATAC-seq
pCHi-C
total RNA-seq
DNase-seq
RRBS
in vitro differentiated cells
immature adipocyte
2
2
primary cell
cardiac fibroblast
1
1
tissue
adipose tissue(adipose white tissue)
1
gastric (mucosa of stomach)
1
stem cell
mesenchymal stem cell
1
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