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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
pCHi-C
13
total RNA-seq
Hi-C
4
ATAC-seq
Assay category
13
Transcription
4
DNA accessibility
DNA binding
Date released
681
February, 2021
291
May, 2020
252
August, 2021
200
May, 2022
189
February, 2023
187
June, 2019
168
July, 2018
145
May, 2021
114
August, 2017
100
July, 2019
61
October, 2019
59
September, 2020
49
April, 2018
47
September, 2023
45
March, 2020
41
November, 2019
41
September, 2018
25
February, 2020
19
April, 2020
November, 2018
16
January, 2021
16
November, 2020
15
May, 2023
8
December, 2019
8
October, 2017
7
August, 2020
5
January, 2019
5
September, 2017
4
January, 2018
4
March, 2019
4
March, 2023
3
August, 2018
3
June, 2018
2
October, 2018
1
August, 2022
1
October, 2022
Available data
41
tsv
15
bigWig
11
bam
Organism
45
Homo sapiens
Biosample type
31
tissue
10
cell line
in vitro differentiated cells
4
stem cell
Organ
10
pancreas
5
heart
4
epithelium
3
musculature of body
2
blood vessel
2
brain
2
connective tissue
2
intestine
2
kidney
2
liver
2
vasculature
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
41
AMP
4
T1D
Genome assembly (visualization)
15
hg19
11
GRCh38
Lab
45
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
assay_slims!
DNA binding
assay_title!
Hi-C
biosample_type!
in vitro differentiated cells
month_released!
November, 2018
BIOSAMPLE
ASSAY
45 results
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pCHi-C
total RNA-seq
ATAC-seq
tissue
islet of Langerhans
2
2
psoas muscle
1
2
aorta
1
1
heart left ventricle
1
1
heart right ventricle
1
1
+ See 16 more…
cell line
EndoC_BH1
2
2
early embryonic cell
2
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
+ See 1 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
neural progenitor cell (neural stem cell)
1
trophoblast
1
See all biosamples
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