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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
MeRIP-seq
9
ATAC-seq
4
total RNA-seq
1
DNase-seq
Assay category
DNA binding
10
DNA accessibility
4
Transcription
Target of assay
5
control
5
nucleotide modification
Date released
689
February, 2021
291
May, 2020
234
May, 2021
202
February, 2023
187
June, 2019
170
August, 2021
166
May, 2022
120
July, 2018
115
August, 2017
105
July, 2019
72
October, 2019
61
March, 2020
48
November, 2019
40
September, 2018
25
February, 2020
19
September, 2020
17
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
12
May, 2023
10
April, 2020
8
January, 2018
8
October, 2017
7
August, 2020
7
December, 2019
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
October, 2022
2
October, 2018
1
August, 2018
1
August, 2022
1
December, 2018
Available data
13
bam
13
bigWig
8
bed narrowPeak
8
fastq
4
tsv
2
bed broadPeak
1
bed bed3+
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
24
Homo sapiens
Biosample type
12
tissue
6
cell line
6
primary cell
Organ
15
pancreas
7
connective tissue
6
epithelium
1
adipose tissue
1
brain
1
spleen
Project
24
AMP
Genome assembly (visualization)
14
GRCh38
13
hg19
Lab
13
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
1
Stephen Parker, UMich
Audit category:
6
inconsistent ontology term
assay_slims!
DNA binding
assay_title!
HiChIP
single cell RNA-seq
BIOSAMPLE
ASSAY
24 results
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Clear Filters
MeRIP-seq
ATAC-seq
total RNA-seq
DNase-seq
tissue
islet of Langerhans
4
1
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
spleen
1
cell line
EndoC_BH1
6
primary cell
osteoblast
1
4
1
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