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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ATAC-seq
10
snATAC-seq
9
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
HiChIP
1
pCHi-C
Assay category
21
DNA accessibility
9
Transcription
DNA binding
Date released
21
February, 2023
8
January, 2021
4
March, 2020
1
May, 2021
Available data
2
bam
2
bigWig
2
tsv
Organism
34
Homo sapiens
Biosample type
primary cell
29
tissue
5
cell line
Organ
30
pancreas
2
epithelium
1
thymus
Project
2145
AMP
47
KPMP
34
T1D
19
LungMap
4
community
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
30
Kyle Gaulton, UCSD
4
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA binding
assay_title!
HiChIP
biosample_type!
primary cell
BIOSAMPLE
ASSAY
34 results
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ATAC-seq
snATAC-seq
total RNA-seq
CRISPR genome editing followed by DNA sequencing
pCHi-C
tissue
islet of Langerhans
11
6
7
pancreas
4
thymus
1
cell line
EndoC_BH1
2
3
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