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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
87
DNase-seq
Assay category
87
DNA accessibility
DNA binding
Date released
84
June, 2019
1
August, 2017
1
November, 2018
1
November, 2020
Available data
587
bigWig
583
bam
500
tsv
161
bed narrowPeak
94
bed bed3+
93
bigBed narrowPeak
87
bed broadPeak
87
bigBed broadPeak
64
xls
62
txt
11
fastq
7
bed bedMethyl
7
bigBed bedMethyl
6
bed bed3
5
csv
4
bed bedgraph
1
bedpe bed3+
1
hdf5
1
hic
Organism
87
Homo sapiens
Biosample type
70
tissue
16
primary cell
1
in vitro differentiated cells
Organ
78
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
ureter
16
epithelium
11
vasculature
9
blood vessel
9
connective tissue
9
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
87
AMP
Genome assembly (visualization)
87
GRCh38
79
hg19
Lab
87
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA binding
assay_title!
RNA microarray
BIOSAMPLE
ASSAY
87 results
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DNase-seq
tissue
kidney
13
renal cortex interstitium
11
renal pelvis
10
right kidney
10
left kidney
9
+ See 5 more…
primary cell
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
brain pericyte
1
epithelial cell of proximal tubule
1
+ See 7 more…
in vitro differentiated cells
adipocyte
1
See all biosamples
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