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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
159
total RNA-seq
5
DNase-seq
3
ATAC-seq
3
small RNA-seq
WGBS
Assay category
DNA binding
162
Transcription
8
DNA accessibility
Date released
143
May, 2020
7
July, 2019
5
December, 2019
5
January, 2019
3
November, 2018
2
June, 2019
2
October, 2019
1
August, 2017
1
February, 2021
1
March, 2020
Available data
189
bigWig
174
tsv
170
bam
28
bed narrowPeak
11
fastq
7
bed bed3+
6
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
0
cool
Organism
170
Homo sapiens
Biosample type
156
tissue
8
primary cell
6
cell line
Organ
490
pancreas
489
connective tissue
403
adipose tissue
191
epithelium
170
liver
112
heart
92
kidney
81
vasculature
79
blood vessel
68
artery
66
bone element
48
limb
47
brain
39
musculature of body
18
ureter
14
embryo
8
skeleton
7
nerve
4
eye
3
vein
2
spleen
1
pericardium
Project
170
AMP
Genome assembly (visualization)
170
GRCh38
170
hg19
Lab
170
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
assay_slims!
DNA binding
assay_title!
WGBS
BIOSAMPLE
ASSAY
170 results
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Clear Filters
total RNA-seq
DNase-seq
ATAC-seq
small RNA-seq
tissue
liver
147
2
1
right lobe of liver
2
1
1
2
primary cell
hepatocyte
5
1
Liver fetal (hepatocyte)
1
hepatic stellate cell
1
cell line
HepG2
5
1
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