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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
WGBS
Assay category
15
DNA methylation
Date released
15
July, 2019
Available data
1796
bam
1762
bigWig
1594
tsv
492
bed narrowPeak
fastq
241
bigBed narrowPeak
220
bed bed3+
208
bed broadPeak
206
bigBed broadPeak
161
txt
112
zippedFastqFolder
64
xls
23
bedpe bed3+
23
hic
19
bed bedMethyl
19
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
ibed
1
bedpe
1
tar
1
vcf
Organism
15
Homo sapiens
Biosample type
9
primary cell
6
tissue
Organ
6
epithelium
4
kidney
2
brain
2
heart
2
pancreas
1
connective tissue
1
eye
1
liver
1
musculature of body
1
pericardium
1
vasculature
Project
15
AMP
Genome assembly (visualization)
15
hg19
Lab
15
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA binding
assay_title!
WGBS
files.file_type!
fastq
BIOSAMPLE
ASSAY
15 results
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RRBS
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
tissue
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
pancreas
1
+ See 1 more…
See all biosamples
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